Co-expression analysis

Gene ID Contig998_x_at
Gene name
Homology with ArabidopsisSimilar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=3e-23)
Module size 6 genes
NF 0.25
%ile 31.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.87Contig998_x_atContig998--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.6784.70.90Contig998_s_atContig998--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.5066.90.84HW02O09u_s_atHW02O09u--5e-1At5g0951040S ribosomal protein S15 (RPS15D)O.I.H.G.S.X.
0.5066.90.84Contig8001_atContig8001--4e-12At5g38820amino acid transporter family proteinO.I.H.G.S.X.
0.1818.20.85Contig14542_atContig14542--4e-23At1g69830AMY3 (ALPHA-AMYLASE-LIKE 3)O.I.H.G.S.X.
0.097.40.84HVSMEg0015J02r2_s_atHVSMEg0015J02r2--2e-1At1g10060branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.999.8GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
14.999.5GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
10.799.2GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
10.699.2GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.898.6GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
6.198.0GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
4.196.2GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.995.8GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
3.895.7GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.595.1GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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