Co-expression analysis

Gene ID	Contig9944_s_at
Gene name
Homology with Arabidopsis	Similar to At2g36890: RAX2 (REGULATOR OF AXILLARY MERISTEMS 2) (HF=4e+0)
Module size	6 genes
NF	0.33
%ile	44.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.94	Contig9944_s_at	Contig9944	-	-	4e+0	At2g36890	RAX2 (REGULATOR OF AXILLARY MERISTEMS 2)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.95	Contig661_at	Contig661	-	-	4e-23	At2g39390	60S ribosomal protein L35 (RPL35B)	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.94	HV10J10u_at	HV10J10u	-	-	2e-4	At2g24200	cytosol aminopeptidase	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.94	Contig5399_at	Contig5399	-	-	4e-27	At2g20860	LIP1 (LIPOIC ACID SYNTHASE 1)	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.94	Contig10432_at	Contig10432	-	-	2e-29	At3g60750	transketolase, putative	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.93	Contig12269_s_at	Contig12269	-	-	8e-10	At4g30850	HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	98.6	GSM372957	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.3	98.1	GSM261067	Xantha s-46 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.5	97.6	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.2	97.4	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.0	97.2	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.4	96.6	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.2	96.3	GSM261061	Xantha b-12 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.2	96.3	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.8	95.7	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.5	95.1	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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