Co-expression analysis

Gene ID Contig9920_at
Gene name
Homology with ArabidopsisSimilar to At3g15095: unknown protein (HF=7e-1)
Module size 7 genes
NF 0.40
%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.87Contig9920_atContig9920--7e-1At3g15095unknown proteinO.I.H.G.S.X.
0.5369.70.87Contig22098_atContig22098--4e-2At1g01020ARV1O.I.H.G.S.X.
0.5066.90.89Contig22141_s_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.5066.90.90Contig5609_atContig5609--5e+0At2g01905CYCJ18 (CYCLIN J18)O.I.H.G.S.X.
0.3647.10.92Contig2163_atContig2163--3e-1At2g04046-O.I.H.G.S.X.
0.3240.30.89HV08D21r_atHV08D21r--6e+0At3g29305unknown proteinO.I.H.G.S.X.
0.2021.10.88Contig6578_atContig6578--1e-27At1g64650-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5774.90.62Contig2170_atContig2170--3e-1At2g04046-O.I.H.G.S.X.
0.5572.00.86Contig2994_atContig2994--9e-11At1g32470glycine cleavage system H protein, mitochondrial, putativeO.I.H.G.S.X.
0.5572.00.87Contig25507_atContig25507--4e-1At3g22740HMT3O.I.H.G.S.X.
0.5066.90.85HV06A23u_x_atHV06A23u--1e+1At5g54980integral membrane family proteinO.I.H.G.S.X.
0.4863.20.80Contig11775_atContig11775--4e-1At5g61230ankyrin repeat family proteinO.I.H.G.S.X.
0.4762.20.81HV11O23u_atHV11O23u--2e+0At3g28230-O.I.H.G.S.X.
0.4661.00.88Contig23884_atContig23884--1e+0At3g60590unknown proteinO.I.H.G.S.X.
0.4458.90.76Contig6701_s_atContig6701--1e+0At5g55508unknown proteinO.I.H.G.S.X.
0.4458.90.87Contig12050_atContig12050--4e+0At5g54740protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4458.90.93Contig22115_atContig22115--7e-2At4g24960ATHVA22DO.I.H.G.S.X.
0.4053.10.83Contig2790_s_atContig2790thaumatin-like protein TLP7-3e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)O.I.H.G.S.X.
0.4053.10.85Contig24887_atContig24887--1e+0At4g35650isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.4053.10.86HV06B11u_atHV06B11u--4e+0At5g23440FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)O.I.H.G.S.X.
0.3342.60.76Contig6391_atContig6391--2e-3At1g62240unknown proteinO.I.H.G.S.X.
0.3342.60.81AF085166_atAF085166--1e+0At5g02070protein kinase-relatedO.I.H.G.S.X.
0.3138.60.81Contig22112_atContig22112--9e-2At1g10200WLIM1O.I.H.G.S.X.
0.3138.60.83Contig2212_s_atContig2212Pathogenesis-related protein 1-4e+0At4g25790allergen V5/Tpx-1-related family proteinO.I.H.G.S.X.
0.3037.00.79AF085166_x_atAF085166--1e+0At5g02070protein kinase-relatedO.I.H.G.S.X.
0.2935.50.78Contig20401_atContig20401--3e-1At3g63350AT-HSFA7BO.I.H.G.S.X.
0.2935.50.87Contig5607_s_atContig5607--4e-1At3g17160unknown proteinO.I.H.G.S.X.
0.2935.50.91Contig14575_atContig14575--7e-26At4g38040exostosin family proteinO.I.H.G.S.X.
0.2835.50.88Contig13352_atContig13352--2e-16At2g13440glucose-inhibited division family A proteinO.I.H.G.S.X.
0.2732.10.90rbaal14c13_atrbaal14c13--3e+0At1g67870glycine-rich proteinO.I.H.G.S.X.
0.2630.40.85Contig3640_atContig3640--5e-64At4g23100GSH1 (GLUTAMATE-CYSTEINE LIGASE)O.I.H.G.S.X.
0.2528.90.85Contig26501_atContig26501--3e-1At1g51000unknown proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.197.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.997.1GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
4.596.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.496.6GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.296.3GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372971genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372946genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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