Co-expression analysis

Gene ID Contig9920_at
Gene name
Homology with ArabidopsisSimilar to At3g15095: unknown protein (HF=7e-1)
Module size 7 genes
NF 0.40
%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.87Contig9920_atContig9920--7e-1At3g15095unknown proteinO.I.H.G.S.X.
0.5369.70.87Contig22098_atContig22098--4e-2At1g01020ARV1O.I.H.G.S.X.
0.5066.90.89Contig22141_s_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.5066.90.90Contig5609_atContig5609--5e+0At2g01905CYCJ18 (CYCLIN J18)O.I.H.G.S.X.
0.3647.10.92Contig2163_atContig2163--3e-1At2g04046-O.I.H.G.S.X.
0.3240.30.89HV08D21r_atHV08D21r--6e+0At3g29305unknown proteinO.I.H.G.S.X.
0.2021.10.88Contig6578_atContig6578--1e-27At1g64650-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.197.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.997.1GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
4.596.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.496.6GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.296.3GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372971genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372946genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.8812.1.A1_at, orthologous to the query gene, Contig9920_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7389.9Zm.8812.1.A1_atAt3g15095hypothetical protein LOC100274414-2e-7At1g16560Per1-like family proteinO.I.H.G.S.X.
0.4455.7Zm.18801.1.A1_atAt3g15095hypothetical protein LOC100191640-7e-3At2g30580DRIP2 (DREB2A-INTERACTING PROTEIN 2)O.I.H.G.S.X.
0.3336.0Zm.7116.1.A1_atAt3g15095beta-expansin 4-7e-1At1g65680ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)O.I.H.G.S.X.
0.2928.1Zm.899.1.A1_atAt3g15095esterase-6e-7At1g29840esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.2724.6Zm.16213.1.S1_atAt3g15095hypothetical protein LOC100216627-7e+0At3g29270ubiquitin-protein ligaseO.I.H.G.S.X.
0.136.8Zm.18085.1.S1_atAt3g15095hypothetical protein LOC100274126-5e-11At5g13800hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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