Co-expression analysis

Gene ID Contig9920_at
Gene name
Homology with ArabidopsisSimilar to At3g15095: unknown protein (HF=7e-1)
Module size 7 genes
NF 0.40
%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.87Contig9920_atContig9920--7e-1At3g15095unknown proteinO.I.H.G.S.X.
0.5369.70.87Contig22098_atContig22098--4e-2At1g01020ARV1O.I.H.G.S.X.
0.5066.90.89Contig22141_s_atContig22141--3e+0At3g07440unknown proteinO.I.H.G.S.X.
0.5066.90.90Contig5609_atContig5609--5e+0At2g01905CYCJ18 (CYCLIN J18)O.I.H.G.S.X.
0.3647.10.92Contig2163_atContig2163--3e-1At2g04046-O.I.H.G.S.X.
0.3240.30.89HV08D21r_atHV08D21r--6e+0At3g29305unknown proteinO.I.H.G.S.X.
0.2021.10.88Contig6578_atContig6578--1e-27At1g64650-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.197.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.997.1GSM261027ABA-Late-rep1GSE10328ABA experimentLink to GEO
4.596.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.496.6GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.296.3GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372971genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM372946genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os10g0524100, orthologous to the query gene, Contig9920_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8094.6Os10g0524100At3g15095-Per1-like family protein3e+0At1g19190hydrolaseO.I.H.G.S.X.
0.3846.9Os12g0613300At3g15095-Myb, DNA-binding domain containing protein1e-2At1g49950DNA-binding protein, putativeO.I.H.G.S.X.
0.3338.8Os04g0672800At3g15095-Conserved hypothetical protein3e+0At3g21865PEX22 (peroxin 22)O.I.H.G.S.X.
0.2931.1Os02g0290300At3g15095-Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein4e-10At1g04140transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2727.5Os07g0461600At3g15095-TA7 protein (Fragment)1e+0At2g19890unknown proteinO.I.H.G.S.X.
0.2727.5Os09g0525600At3g15095-UBX domain containing protein2e-11At4g11740SAY1O.I.H.G.S.X.
0.1510.3Os02g0781800At3g15095-WD40-like domain containing protein6e-10At3g54190-O.I.H.G.S.X.
0.149.3Os01g0367300At3g15095-Conserved hypothetical protein2e+0At2g19040RALFL12 (RALF-LIKE 12)O.I.H.G.S.X.
0.116.5Os01g0945800At3g15095-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-17At4g36960RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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