Co-expression analysis

Gene ID Contig9902_at
Gene name
Homology with ArabidopsisSimilar to At5g35170: adenylate kinase family protein (HF=2e+0)
Module size 7 genes
NF 0.62
%ile 83.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.96Contig9902_atContig9902--2e+0At5g35170adenylate kinase family proteinO.I.H.G.S.X.
0.7187.10.95Contig1056_s_atContig1056--5e-140At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.6784.70.96Contig13988_atContig13988--5e-4At4g24020NLP7 (NIN LIKE PROTEIN 7)O.I.H.G.S.X.
0.5774.90.96Contig12434_atContig12434--2e-6At4g30930NFD1 (NUCLEAR FUSION DEFECTIVE 1)O.I.H.G.S.X.
0.5572.00.97Contig13783_atContig13783--4e-1At2g41225unknown proteinO.I.H.G.S.X.
0.4863.20.96Contig9200_atContig9200--6e-1At5g10230ANNAT7 (ANNEXIN ARABIDOPSIS 7)O.I.H.G.S.X.
0.4458.90.96Contig6826_s_atContig6826--8e-1At2g15535LCR10 (Low-molecular-weight cysteine-rich 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
7.498.5GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
7.198.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.797.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.497.5GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.097.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.997.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.496.6GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.196.2GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.5833.1.A1_at, orthologous to the query gene, Contig9902_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.5833.1.A1_atAt5g35170adenylate kinase-1e-2At5g47840AMK2 (Adenosine monophosphate kinase)O.I.H.G.S.X.
0.6785.8Zm.606.1.A2_s_atAt5g35170plasma membrane integral protein ZmPIP2-2 /// plasma membrane intrinsic protein2-1e-37At2g37180RD28 (RESPONSIVE TO DESICCATION 28)O.I.H.G.S.X.
0.5976.1Zm.6061.1.S1_atAt5g35170hypothetical protein LOC100192928-2e-46At5g20570RBX1 (RING-BOX 1)O.I.H.G.S.X.
0.4251.3Zm.5823.1.A1_atAt5g35170hypothetical protein LOC100194104-2e-10At1g14310haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.4251.3Zm.5824.1.A1_atAt5g35170--2e+0At5g10680calmodulin-binding protein-relatedO.I.H.G.S.X.
0.4048.5Zm.4061.1.S1_atAt5g35170--3e+0At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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