Co-expression analysis

Gene ID Contig9902_at
Gene name
Homology with ArabidopsisSimilar to At5g35170: adenylate kinase family protein (HF=2e+0)
Module size 7 genes
NF 0.62
%ile 83.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.96Contig9902_atContig9902--2e+0At5g35170adenylate kinase family proteinO.I.H.G.S.X.
0.7187.10.95Contig1056_s_atContig1056--5e-140At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.6784.70.96Contig13988_atContig13988--5e-4At4g24020NLP7 (NIN LIKE PROTEIN 7)O.I.H.G.S.X.
0.5774.90.96Contig12434_atContig12434--2e-6At4g30930NFD1 (NUCLEAR FUSION DEFECTIVE 1)O.I.H.G.S.X.
0.5572.00.97Contig13783_atContig13783--4e-1At2g41225unknown proteinO.I.H.G.S.X.
0.4863.20.96Contig9200_atContig9200--6e-1At5g10230ANNAT7 (ANNEXIN ARABIDOPSIS 7)O.I.H.G.S.X.
0.4458.90.96Contig6826_s_atContig6826--8e-1At2g15535LCR10 (Low-molecular-weight cysteine-rich 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
7.498.5GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
7.198.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.797.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.497.5GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.097.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.997.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.496.6GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.196.2GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.19971.1.S1_at, orthologous to the query gene, Contig9902_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6483.6Ta.19971.1.S1_atAt5g35170--1e-5At5g47840AMK2 (Adenosine monophosphate kinase)O.I.H.G.S.X.
0.7589.8Ta.10392.1.A1_atAt5g35170--7e-3At3g17660AGD15 (ARF-GAP domain 15)O.I.H.G.S.X.
0.7188.0Ta.25620.1.S1_x_atAt5g35170--3e-3At5g50530CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.6786.3TaAffx.10194.2.S1_atAt5g35170--9e-1At5g55508unknown proteinO.I.H.G.S.X.
0.6383.1TaAffx.29360.1.A1_atAt5g35170--3e-1At3g20310ERF7 (ETHYLINE RESPONSE FACTOR 7)O.I.H.G.S.X.
0.5979.8Ta.25620.1.S1_atAt5g35170--3e-3At5g50530CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.5779.2Ta.274.1.S1_atAt5g35170sucrose-6F-phosphate phosphohydrolase SPP2-4e-18At2g35840sucrose-phosphatase 1 (SPP1)O.I.H.G.S.X.
0.5475.5Ta.274.2.S1_x_atAt5g35170sucrose-6F-phosphate phosphohydrolase SPP3-1e-24At2g35840sucrose-phosphatase 1 (SPP1)O.I.H.G.S.X.
0.5072.4Ta.3552.1.S1_atAt5g35170--8e+0At5g49010SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5)O.I.H.G.S.X.
0.4464.5Ta.23906.1.S1_atAt5g35170--9e-13At3g05580serine/threonine protein phosphatase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage