Co-expression analysis

Gene ID Contig9902_at
Gene name
Homology with ArabidopsisSimilar to At5g35170: adenylate kinase family protein (HF=2e+0)
Module size 7 genes
NF 0.62
%ile 83.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.96Contig9902_atContig9902--2e+0At5g35170adenylate kinase family proteinO.I.H.G.S.X.
0.7187.10.95Contig1056_s_atContig1056--5e-140At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.6784.70.96Contig13988_atContig13988--5e-4At4g24020NLP7 (NIN LIKE PROTEIN 7)O.I.H.G.S.X.
0.5774.90.96Contig12434_atContig12434--2e-6At4g30930NFD1 (NUCLEAR FUSION DEFECTIVE 1)O.I.H.G.S.X.
0.5572.00.97Contig13783_atContig13783--4e-1At2g41225unknown proteinO.I.H.G.S.X.
0.4863.20.96Contig9200_atContig9200--6e-1At5g10230ANNAT7 (ANNEXIN ARABIDOPSIS 7)O.I.H.G.S.X.
0.4458.90.96Contig6826_s_atContig6826--8e-1At2g15535LCR10 (Low-molecular-weight cysteine-rich 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
7.498.5GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
7.198.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.797.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.497.5GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.097.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.997.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.496.6GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.196.2GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, Ptp.3804.1.S1_at, orthologous to the query gene, Contig9902_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7393.6Ptp.3804.1.S1_atAt5g35170hypothetical protein-4e-61At5g47840AMK2 (Adenosine monophosphate kinase)O.I.H.G.S.X.
0.6791.1PtpAffx.125938.1.A1_atAt5g35170hypothetical protein-5e-6At1g26180unknown proteinO.I.H.G.S.X.
0.6791.1PtpAffx.121105.1.A1_atAt5g35170--2e+0At1g02740chromatin bindingO.I.H.G.S.X.
0.6086.0PtpAffx.22554.1.S1_atAt5g35170hypothetical protein-6e-1At1g30190unknown proteinO.I.H.G.S.X.
0.4369.7PtpAffx.52722.1.A1_atAt5g35170hypothetical protein-9e-50At2g01110APG2 (ALBINO AND PALE GREEN 2)O.I.H.G.S.X.
0.2950.5PtpAffx.204616.1.S1_atAt5g35170hypothetical protein-7e-26At2g21710EMB2219 (embryo defective 2219)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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