Co-expression analysis

Gene ID Contig9794_at
Gene name
Homology with ArabidopsisSimilar to At5g61030: GR-RBP3 (glycine-rich RNA-binding protein 3) (HF=4e-1)
Module size 6 genes
NF 0.40
%ile 55.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.91Contig9794_atContig9794--4e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.H.G.S.X.
0.5066.90.93Contig13233_atContig13233--5e-1At2g42260UVI4 (UV-B-INSENSITIVE 4)O.I.H.G.S.X.
0.5066.90.95Contig9793_atContig9793--8e-26At1g61140EDA16 (embryo sac development arrest 16)O.I.H.G.S.X.
0.4053.10.94Contig8904_atContig8904--2e-8At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.2935.50.93Contig6837_atContig6837--1e-2At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.
0.1818.20.93Contig11301_atContig11301--9e-2At3g06420ATG8H (autophagy 8h)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.599.5GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.297.4GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.197.3GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.097.2GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.997.1GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.997.1GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.796.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.796.9GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.196.2GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.995.8GSM130802salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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