Co-expression analysis

Gene ID	Contig9750_at
Gene name
Homology with Arabidopsis	Similar to At5g59740: UDP-galactose/UDP-glucose transporter-related (HF=3e-10)
Module size	10 genes
NF	0.52
%ile	72.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.51	67.5	0.91	Contig9750_at	Contig9750	-	-	3e-10	At5g59740	UDP-galactose/UDP-glucose transporter-related	O.I.	H.G.	S.X.	Please select
0.78	91.2	0.94	Contig7239_s_at	Contig7239	-	-	1e-1	At3g42180	catalytic/ transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.93	Contig7241_at	Contig7241	-	-	2e+0	At4g14815	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.56	74.3	0.94	Contig11093_at	Contig11093	-	-	3e-21	At4g20440	smB (small nuclear ribonucleoprotein associated protein B)	O.I.	H.G.	S.X.	Please select
0.54	70.3	0.93	Contig24266_at	Contig24266	-	-	1e+0	At3g04500	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.94	Contig12547_at	Contig12547	-	-	1e+0	At3g54360	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig1269_at	Contig1269	-	-	2e-84	At3g17390	MTO3 (METHIONINE OVER-ACCUMULATOR 3)	O.I.	H.G.	S.X.	Please select
0.42	55.2	0.93	Contig5784_at	Contig5784	-	-	2e-16	At1g12600	-	O.I.	H.G.	S.X.	Please select
0.39	50.5	0.93	Contig33_at	Contig33	-	-	6e+0	At4g04780	MED21 (MEDIATOR 21)	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.94	Contig6606_at	Contig6606	-	-	5e+0	At5g09920	NRPB4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	97.3	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.0	96.0	GSM398256	Martin_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.7	95.5	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.6	95.3	GSM398257	Martin_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.5	95.1	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.4	94.8	GSM398255	Martin_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.3	94.6	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.2	94.3	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.1	94.1	GSM398259	Martin_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0	93.8	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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