Co-expression analysis

Gene ID Contig9749_at
Gene name
Homology with ArabidopsisSimilar to At1g52310: protein kinase family protein / C-type lectin domain-containing protein (HF=2e-14)
Module size 14 genes
NF 0.17
%ile 20.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9398.70.90Contig9749_atContig9749--2e-14At1g52310protein kinase family protein / C-type lectin domain-containing proteinO.I.H.G.S.X.
0.3647.10.95Contig9165_atContig9165--2e-3At4g31410unknown proteinO.I.H.G.S.X.
0.3342.60.94Contig24272_atContig24272--3e-3At5g10400histone H3O.I.H.G.S.X.
0.2528.90.93Contig10020_atContig10020--3e-5At1g29810dehydratase familyO.I.H.G.S.X.
0.2528.90.95S0000800042H10F1_s_atS0000800042H10F1--2e-1At3g26147unknown proteinO.I.H.G.S.X.
0.2326.10.94Contig4782_atContig4782--4e-1At5g11950protein homodimerizationO.I.H.G.S.X.
0.2122.60.94Contig9296_atContig9296--1e-1At2g46030UBC6 (ubiquitin-conjugating enzyme 6)O.I.H.G.S.X.
0.1514.10.93Contig14462_atContig14462--1e+0At4g00670DNA bindingO.I.H.G.S.X.
0.1311.60.95Contig7117_atContig7117--8e-4At3g17880ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)O.I.H.G.S.X.
0.119.40.93Contig7383_atContig7383--5e-8At5g61510NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.119.40.95Contig9191_atContig9191--2e+0At2g18200unknown proteinO.I.H.G.S.X.
0.108.40.95Contig9717_atContig9717--2e-7At1g33990MES14 (METHYL ESTERASE 14)O.I.H.G.S.X.
0.075.80.95Contig21004_atContig21004--2e+1At5g19030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.064.80.93HO02E11S_s_atHO02E11S--1e-6At2g31010protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.1GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.394.6GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.194.1GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.194.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.093.8GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.993.4GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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