| Gene ID | Contig9642_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At4g27960: UBC9 (UBIQUITIN CONJUGATING ENZYME 9) (HF=1e-13) |
| Module size | 6 genes |
| NF | 0.56 |
| %ile | 77.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 66.9 | 0.95 | Contig9642_at | Contig9642 | - | - | 1e-13 | At4g27960 | UBC9 (UBIQUITIN CONJUGATING ENZYME 9) | O.I. | H.G. | S.X. | |
| 0.71 | 87.1 | 0.96 | Contig9200_at | Contig9200 | - | - | 6e-1 | At5g10230 | ANNAT7 (ANNEXIN ARABIDOPSIS 7) | O.I. | H.G. | S.X. | |
| 0.61 | 78.7 | 0.96 | Contig1056_s_at | Contig1056 | - | - | 5e-140 | At4g05050 | UBQ11 (UBIQUITIN 11) | O.I. | H.G. | S.X. | |
| 0.46 | 61.0 | 0.96 | Contig6616_at | Contig6616 | - | - | 1e-57 | At4g35260 | IDH1 (ISOCITRATE DEHYDROGENASE 1) | O.I. | H.G. | S.X. | |
| 0.46 | 61.0 | 0.96 | Contig12434_at | Contig12434 | - | - | 2e-6 | At4g30930 | NFD1 (NUCLEAR FUSION DEFECTIVE 1) | O.I. | H.G. | S.X. | |
| 0.44 | 58.9 | 0.95 | Contig13988_at | Contig13988 | - | - | 5e-4 | At4g24020 | NLP7 (NIN LIKE PROTEIN 7) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 9.5 | 99.0 | GSM261045 | after 3 days in mannitol medium rep1 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 8.4 | 98.8 | GSM215732 | gibberellin plus Yariv-reagent treatment rep2 | GSE8712 | The effects of Yariv-reagent on barley aleurone GA signaling | |
| 7.5 | 98.6 | GSM419980 | Awn_Rep3 | GSE16754 | Comparative transcriptional profiling of organs of the barley spike | |
| 7.5 | 98.6 | GSM440971 | Control awn_Rep3 | GSE17669 | Gene expression in the barley spike during drought stress | |
| 7.5 | 98.6 | GSM261046 | after 3 days in mannitol medium rep2 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 6.3 | 98.1 | GSM419979 | Awn_Rep2 | GSE16754 | Comparative transcriptional profiling of organs of the barley spike | |
| 6.3 | 98.1 | GSM440970 | Control awn_Rep2 | GSE17669 | Gene expression in the barley spike during drought stress | |
| 6.1 | 98.0 | GSM146379 | Maythorpe shoot Salt, biological rep 2 | GSE6325 | Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise | |
| 5.9 | 97.9 | GSM419978 | Awn_Rep1 | GSE16754 | Comparative transcriptional profiling of organs of the barley spike | |
| 5.9 | 97.9 | GSM440969 | Control awn_Rep1 | GSE17669 | Gene expression in the barley spike during drought stress | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 91.5 | Gma.15387.1.S1_s_at | At4g27960 | - | - | 8e-55 | At5g41700 | UBC8 (UBIQUITIN CONJUGATING ENZYME 8) | O.I. | H.G. | S.X. | |
| 0.67 | 86.1 | Gma.10823.1.S1_at | At4g27960 | - | - | 3e-32 | At1g65220 | eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein | O.I. | H.G. | S.X. | |
| 0.60 | 80.7 | Gma.4155.1.S1_at | At4g27960 | EREBP/AP2 transcription factor | - | 2e-26 | At1g53910 | RAP2.12 | O.I. | H.G. | S.X. | |
| 0.57 | 78.8 | Gma.16756.1.S1_x_at | At4g27960 | - | - | 4e-66 | At3g52560 | UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4) | O.I. | H.G. | S.X. | |
| 0.57 | 78.8 | GmaAffx.8927.1.S1_at | At4g27960 | - | - | 5e-32 | At4g39100 | SHL1 (short life) | O.I. | H.G. | S.X. | |
| 0.55 | 76.3 | GmaAffx.8999.1.S1_at | At4g27960 | - | - | 1e-32 | At5g25760 | PEX4 (PEROXIN4) | O.I. | H.G. | S.X. | |
| 0.44 | 63.3 | Gma.5720.1.S1_s_at | At4g27960 | - | - | 4e-5 | At1g51200 | zinc finger (AN1-like) family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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