Co-expression analysis

Gene ID Contig9511_at
Gene name
Homology with ArabidopsisSimilar to At1g02140: MAGO (MAGO NASHI) (HF=2e-15)
Module size 6 genes
NF 0.05
%ile 6.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.91Contig9511_atContig9511--2e-15At1g02140MAGO (MAGO NASHI)O.I.H.G.S.X.
0.1210.40.92Contig13997_atContig13997--5e-1At3g05327-O.I.H.G.S.X.
0.064.80.94Contig11945_s_atContig11945--1e+0At1g13450DNA binding protein GT-1O.I.H.G.S.X.
0.043.40.94Contig8908_atContig8908--3e-12At2g21270ubiquitin fusion degradation UFD1 family proteinO.I.H.G.S.X.
0.032.60.94Contig13143_s_atContig13143--5e+0At5g38565-O.I.H.G.S.X.
0.021.80.92Contig9517_atContig9517--2e-45At5g40200DegP9 (DegP protease 9)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.498.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.198.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.097.2GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.296.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.096.0GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.595.1GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.494.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.394.6GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.394.6GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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