Co-expression analysis

Gene ID Contig9472_at
Gene name
Homology with ArabidopsisSimilar to At1g70300: KUP6 (HF=2e-5)
Module size 6 genes
NF 0.67
%ile 88.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.85Contig9472_atContig9472--2e-5At1g70300KUP6O.I.H.G.S.X.
0.6784.70.88Contig12939_atContig12939--4e-2At1g44760universal stress protein (USP) family proteinO.I.H.G.S.X.
0.6784.70.91Contig1474_atContig1474--1e-41At1g0969060S ribosomal protein L21 (RPL21C)O.I.H.G.S.X.
0.6784.70.93Contig16209_atContig16209--2e+0At5g55570unknown proteinO.I.H.G.S.X.
0.5066.90.91Contig2592_atContig2592--1e-17At5g10860CBS domain-containing proteinO.I.H.G.S.X.
0.4053.10.86Contig11973_atContig11973--1e+0At1g65350UBQ13O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.1GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
2.692.3GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
2.692.3GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.591.9GSM419972Lemma_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
2.591.9GSM440957Control lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.491.4GSM1608317% SWC rep1GSE6990Barley drought stressLink to GEO
2.390.9GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.390.9GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.390.9GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
2.390.9GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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