Co-expression analysis

Gene ID Contig9426_at
Gene name
Homology with ArabidopsisSimilar to At5g51340: unknown protein (HF=2e-2)
Module size 6 genes
NF 0.91
%ile 99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.96Contig9426_atContig9426--2e-2At5g51340unknown proteinO.I.H.G.S.X.
0.9198.10.95Contig15145_atContig15145--1e-61At3g09920PIP5K9 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE)O.I.H.G.S.X.
0.9198.10.96HV_CEa0012H15r2_atHV_CEa0012H15r2--4e+0At1g11450nodulin MtN21 family proteinO.I.H.G.S.X.
0.9198.10.96Contig21454_x_atContig21454--4e+0At4g01265raffinose synthase family protein / seed imbibition protein-relatedO.I.H.G.S.X.
0.8394.00.95Contig23898_atContig23898--4e-1At2g01610invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5774.90.96Contig21304_s_atContig21304--3e+0At5g10390histone H3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.199.3GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
9.699.0GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.595.1GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.494.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os04g0347600, orthologous to the query gene, Contig9426_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9699.7Os04g0347600At5g51340-TPR-like domain containing protein1e+0At2g45440DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE)O.I.H.G.S.X.
0.5978.0Os10g0391100At5g51340-Hypothetical protein1e-1At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.4253.9Os08g0333000At5g51340-F7O18.23 protein (SWP1) (Struwwelpeter 1 protein)1e-25At3g04740SWP (STRUWWELPETER)O.I.H.G.S.X.
0.4152.4Os08g0521400At5g51340-Zn-finger, Ran-binding domain containing protein3e+0At4g38700disease resistance-responsive family proteinO.I.H.G.S.X.
0.4152.4Os10g0382300At5g51340-CTLH, C-terminal to LisH motif domain containingprotein2e-11At5g66810-O.I.H.G.S.X.
0.3541.7Os06g0105600At5g51340-Hypothetical protein3e-4At5g47480unknown proteinO.I.H.G.S.X.
0.3338.8Os03g0268200At5g51340-Protein kinase domain containing protein3e-1At2g37840protein kinase family proteinO.I.H.G.S.X.
0.3236.3Os01g0261100At5g51340-Zn-finger, RING domain containing protein1e-2At1g19680protein binding / zinc ion bindingO.I.H.G.S.X.
0.3236.3Os02g0516600At5g51340-Zn-finger, RING domain containing protein5e-3At3g26730zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3236.3Os02g0758100At5g51340-LMBR1-like conserved region domain containingprotein2e-30At5g65290LMBR1 integral membrane family proteinO.I.H.G.S.X.
0.3032.7Os01g0246100At5g51340-Protein of unknown function DUF902 domaincontaining protein2e-3At1g79000HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1)O.I.H.G.S.X.
0.3032.7Os07g0690300At5g51340-Zn-finger, RING domain containing protein5e-10At3g05670PHD finger family proteinO.I.H.G.S.X.
0.3032.7Os02g0137500At5g51340-HAC4 (Fragment)2e-12At1g79000HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1)O.I.H.G.S.X.
0.2931.1Os01g0846900At5g51340-Transcription initiation factor TFIID domaincontaining protein3e-4At1g17440EER4 (ENHANCED ETHYLENE RESPONSE 4)O.I.H.G.S.X.
0.2831.1Os02g0290300At5g51340-Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein4e-10At1g04140transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2727.5Os04g0602800At5g51340-Protein kinase family protein2e-6At5g35980protein kinase family proteinO.I.H.G.S.X.
0.2625.6Os05g0224800At5g51340-Chromomethylase 32e-1At4g19020CMT2 (chromomethylase 2)O.I.H.G.S.X.
0.2524.1Os12g0233800At5g51340-Basic-leucine zipper (bZIP) transcription factordomain containing protein1e-12At2g35530bZIP transcription factor family proteinO.I.H.G.S.X.
0.1915.1Os12g0137500At5g51340-PP2A regulatory subunit-like protein2e-1At5g53000TAP46 (2A phosphatase associated protein of 46 kD)O.I.H.G.S.X.
0.1813.7Os01g0109700At5g51340-Paired amphipathic helix repeat containing protein9e-19At1g24190SNL3 (SIN3-LIKE 3)O.I.H.G.S.X.
0.1712.6Os01g0779400At5g51340-SNF2-related domain containing protein1e-17At1g50410SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinO.I.H.G.S.X.
0.1712.6Os02g0554000At5g51340-CW-type Zn-finger domain containing protein8e-1At4g14165F-box family protein-relatedO.I.H.G.S.X.
0.1611.3Os05g0508700At5g51340-TRAF-like domain containing protein6e-15At5g43560meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.1510.3Os01g0772200At5g51340-The start codon is not identified.7e-4At1g75510transcription initiation factor IIF beta subunit (TFIIF-beta) family proteinO.I.H.G.S.X.
0.1510.3Os06g0631300At5g51340-Transcription factors TFIIS, elongin A, CRSP70,conserved domain containing protein3e-1At2g42140VQ motif-containing proteinO.I.H.G.S.X.
0.149.3Os03g0802300At5g51340-Hypothetical protein3e-1At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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