Co-expression analysis

Gene ID Contig9426_at
Gene name
Homology with ArabidopsisSimilar to At5g51340: unknown protein (HF=2e-2)
Module size 6 genes
NF 0.91
%ile 99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.96Contig9426_atContig9426--2e-2At5g51340unknown proteinO.I.H.G.S.X.
0.9198.10.95Contig15145_atContig15145--1e-61At3g09920PIP5K9 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE)O.I.H.G.S.X.
0.9198.10.96HV_CEa0012H15r2_atHV_CEa0012H15r2--4e+0At1g11450nodulin MtN21 family proteinO.I.H.G.S.X.
0.9198.10.96Contig21454_x_atContig21454--4e+0At4g01265raffinose synthase family protein / seed imbibition protein-relatedO.I.H.G.S.X.
0.8394.00.95Contig23898_atContig23898--4e-1At2g01610invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5774.90.96Contig21304_s_atContig21304--3e+0At5g10390histone H3O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.199.3GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
9.699.0GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.296.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.196.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
3.595.1GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.494.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g51340, orthologous to the query gene, Contig9426_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
1.00100.0At5g51340835208unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBO.I.H.G.S.X.
0.8693.1At1g33980840295Smg-4/UPF3 family proteinInvolved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD)O.I.H.G.S.X.
0.7888.6At2g25760817118protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MBOPFVAO.I.H.G.S.X.
0.7184.2At1g09730837501Ulp1 protease family proteinF:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;MOFPBVAO.I.H.G.S.X.
0.6478.9At3g22170821781FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3)A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1.O.I.H.G.S.X.
0.5065.3At5g06120830499Ran-binding protein, putativeF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOPO.I.H.G.S.X.
0.4457.2At1g80930844433MIF4G domain-containing protein / MA3 domain-containing proteinF:protein binding, RNA binding, binding;P:translation, RNA metabolic process;C:cytosol, nucleus;MOFBPVAO.I.H.G.S.X.
0.4355.3At1g55325841978-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBPOFO.I.H.G.S.X.
0.3541.6At3g05090819671transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAVO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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