Co-expression analysis

Gene ID	Contig9397_at
Gene name
Homology with Arabidopsis	Similar to At1g22370: AtUGT85A5 (UDP-glucosyl transferase 85A5) (HF=2e-4)
Module size	7 genes
NF	0.08
%ile	10.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	94.8	0.90	Contig9397_at	Contig9397	-	-	2e-4	At1g22370	AtUGT85A5 (UDP-glucosyl transferase 85A5)	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.92	Contig17771_at	Contig17771	-	-	2e+0	At1g33030	O-methyltransferase family 2 protein	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.92	rbaal31c07_s_at	rbaal31c07	-	-	5e+0	At5g04830	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.92	Contig23949_at	Contig23949	-	-	5e+0	At5g20020	RAN2	O.I.	H.G.	S.X.	Please select
0.06	4.8	0.92	Contig5838_at	Contig5838	-	-	1e-1	At5g34940	AtGUS3 (Arabidopsis thaliana glucuronidase 3)	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.94	Contig6496_at	Contig6496	-	-	7e+0	At4g02000	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.92	Contig17594_at	Contig17594	-	-	2e+0	At4g11300	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.7	GSM130806	JA and salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
5.0	97.2	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.7	96.9	GSM71155	Morex stress and unstress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression
4.6	96.8	GSM238426	Endosperm 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.1	96.2	GSM215728	gibberellin treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.0	96.0	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.8	95.7	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.5	95.1	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.3	94.6	GSM311249	28-4_without_aphids_1	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
3.1	94.1	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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