Co-expression analysis

Gene ID Contig9392_at
Gene name
Homology with ArabidopsisSimilar to At5g62780: DNAJ heat shock N-terminal domain-containing protein (HF=5e+0)
Module size 6 genes
NF 0.52
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.90.96Contig9392_atContig9392--5e+0At5g62780DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6784.70.97Contig11977_atContig11977--6e-1At5g62490ATHVA22BO.I.H.G.S.X.
0.6178.70.96Contig10592_atContig10592--1e-2At5g26180NOL1/NOP2/sun family proteinO.I.H.G.S.X.
0.5572.00.96Contig12784_atContig12784--2e-10At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)O.I.H.G.S.X.
0.4255.20.96Contig9449_s_atContig9449--3e-18At2g27350OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.4053.10.96Contig9752_atContig9752--3e+0At2g11651unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.396.4GSM130800control, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.795.5GSM130802salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.695.3GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.695.3GSM130804JA, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.494.8GSM130799control, biological rep1GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.394.6GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.194.1GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.093.8GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.093.8GSM261024ABA-Early-rep1GSE10328ABA experimentLink to GEO
2.993.4GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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