Co-expression analysis

Gene ID	Contig9377_at
Gene name
Homology with Arabidopsis	Similar to At4g26300: emb1027 (embryo defective 1027) (HF=4e-27)
Module size	8 genes
NF	0.39
%ile	52.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	87.1	0.92	Contig9377_at	Contig9377	-	-	4e-27	At4g26300	emb1027 (embryo defective 1027)	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.93	Contig7995_at	Contig7995	-	-	2e-3	At4g28180	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.93	Contig14572_at	Contig14572	-	-	3e-5	At4g21410	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.95	HX08J20r_at	HX08J20r	-	-	2e+0	At4g15920	-	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.95	Contig7512_s_at	Contig7512	-	-	3e-7	At5g12970	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.94	Contig16313_at	Contig16313	-	-	1e-1	At1g35170	-	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.94	HX08J20r_s_at	HX08J20r	-	-	2e+0	At4g15920	-	O.I.	H.G.	S.X.	Please select
0.14	12.9	0.93	Contig1386_s_at	Contig1386	-	-	3e+0	At4g23080	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.6	98.8	GSM282041	Control_dryseed_Morex_rep2	GSE11200	Expression data from malting barley seeds
6.3	98.1	GSM431571	pathogen isolates: Polymyxa betae - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
6.2	98.0	GSM238420	Endosperm 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.6	97.7	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.4	97.5	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.2	97.4	GSM238432	Embryo 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.2	97.4	GSM282025	Control_dryseed_Morex_rep1	GSE11200	Expression data from malting barley seeds
5.1	97.3	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
4.9	97.1	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.5	96.7	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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