Co-expression analysis

Gene ID	Contig9357_at
Gene name
Homology with Arabidopsis	Similar to At1g27770: ACA1 (AUTO-INHIBITED CA2+-ATPASE 1) (HF=2e-42)
Module size	6 genes
NF	0.15
%ile	17.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.93	Contig9357_at	Contig9357	-	-	2e-42	At1g27770	ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.92	rbasd11p06_s_at	rbasd11p06	-	-	4e+0	At3g17609	HYH (HY5-HOMOLOG)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Contig8204_at	Contig8204	-	-	2e+0	At1g30070	SGS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.92	Contig5533_at	Contig5533	-	-	2e-7	At4g33070	pyruvate decarboxylase, putative	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.92	Contig10276_at	Contig10276	-	-	8e-44	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.92	Contig7391_at	Contig7391	-	-	2e-25	At5g42000	ORMDL family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.3	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
6.1	98.0	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2	97.4	GSM440973	Stressed awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.2	97.4	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
5.0	97.2	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
4.8	97.0	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.3	94.6	GSM71156	Morex stress and unstress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.2	94.3	GSM398275	Moroc9-75_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.0	93.8	GSM261025	ABA-Early-rep2	GSE10328	ABA experiment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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