Co-expression analysis

Gene ID Contig9284_at
Gene name
Homology with ArabidopsisSimilar to At3g04060: anac046 (Arabidopsis NAC domain containing protein 46) (HF=3e-18)
Module size 6 genes
NF 0.21
%ile 26.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.93Contig9284_atContig9284--3e-18At3g04060anac046 (Arabidopsis NAC domain containing protein 46)O.I.H.G.S.X.
0.5066.90.95Contig9837_atContig9837--1e-5At5g57930APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2)O.I.H.G.S.X.
0.4458.90.96Contig11899_atContig11899--7e+0At5g67110ALC (ALCATRAZ)O.I.H.G.S.X.
0.3647.10.95Contig105_atContig105--7e-36At1g09200histone H3O.I.H.G.S.X.
0.2935.50.95Contig7392_atContig7392--4e-15At1g31190IMPL1 (MYO-INOSITOL MONOPHOSPHATASE LIKE 1)O.I.H.G.S.X.
0.075.80.93Contig863_s_atContig863--3e-6At3g02720DJ-1 family protein / protease-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.198.9GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
9.198.9GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.397.4GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.397.4GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.997.1GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.997.1GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.796.9GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.396.4GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.396.4GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.396.4GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage