Co-expression analysis

Gene ID	Contig926_x_at
Gene name
Homology with Arabidopsis	Similar to At2g34420: LHB1B2 (HF=1e-44)
Module size	11 genes
NF	0.19
%ile	22.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	58.9	0.76	Contig926_x_at	Contig926	-	-	1e-44	At2g34420	LHB1B2	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.87	Contig19858_at	Contig19858	-	-	2e-5	At1g20790	F-box family protein	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.88	Contig12569_at	Contig12569	-	-	1e+0	At4g01680	MYB55 (myb domain protein 55)	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.89	HV14L22u_at	HV14L22u	-	-	2e-4	At2g42680	MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.81	Contig15853_at	Contig15853	-	-	5e+0	At1g28395	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.83	HV_CEa0014I09r2_at	HV_CEa0014I09r2	-	-	1e+0	At2g26670	TED4 (REVERSAL OF THE DET PHENOTYPE 4)	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.83	Contig11887_at	Contig11887	-	-	2e-6	At3g47350	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.84	Contig137_x_at	Contig137	-	-	1e-6	At1g08880	H2AXA	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.85	Contig78_s_at	Contig78	-	-	4e-5	At1g15690	AVP1	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.85	Contig14498_at	Contig14498	-	-	9e-3	At2g43590	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.82	Contig24327_at	Contig24327	-	-	2e+0	At2g32470	F-box family protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.1	GSM160823	19% SWC rep1	GSE6990	Barley drought stress
4.7	96.9	GSM71156	Morex stress and unstress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
4.6	96.8	GSM160826	19% SWC rep3	GSE6990	Barley drought stress
4.6	96.8	GSM71139	OWB-D stress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
4.0	96.0	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
3.8	95.7	GSM71141	OWB-D stress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.4	94.8	GSM71151	Barke stress and unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.4	94.8	GSM71148	OWB-R unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.3	94.6	GSM71140	OWB-D stress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.3	94.6	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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