| Gene ID | Contig9136_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At3g51140: - (HF=1e-5) |
| Module size | 6 genes |
| NF | 0.46 |
| %ile | 64.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 84.7 | 0.96 | Contig9136_at | Contig9136 | - | - | 1e-5 | At3g51140 | - | O.I. | H.G. | S.X. | |
| 0.43 | 56.4 | 0.97 | Contig15156_at | Contig15156 | - | - | 2e+0 | At1g48210 | serine/threonine protein kinase, putative | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.97 | Contig14753_at | Contig14753 | - | - | 4e-7 | At5g38060 | unknown protein | O.I. | H.G. | S.X. | |
| 0.38 | 49.5 | 0.97 | Contig3633_s_at | Contig3633 | - | - | 7e-1 | At3g13480 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 47.1 | 0.97 | Contig12938_at | Contig12938 | - | - | 1e+0 | At1g36920 | unknown protein | O.I. | H.G. | S.X. | |
| 0.35 | 45.1 | 0.96 | HVSMEa0009I06r2_at | HVSMEa0009I06r2 | - | - | 9e+0 | At5g59060 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 8.9 | 98.9 | GSM238428 | Embryo 16DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.9 | 97.9 | GSM238429 | Embryo 16DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.8 | 97.8 | GSM215729 | gibberellin plus Yariv-reagent treatment rep1 | GSE8712 | The effects of Yariv-reagent on barley aleurone GA signaling | |
| 5.1 | 97.3 | GSM238409 | Pericarp 4DAF; seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.0 | 97.2 | GSM261045 | after 3 days in mannitol medium rep1 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 5.0 | 97.2 | GSM238408 | Pericarp 4DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.9 | 97.1 | GSM213441 | Barley seeds control in Hoagland solution for 12hr | GSE8618 | P. aeruginosa virulent factor to barley | |
| 4.6 | 96.8 | GSM215728 | gibberellin treatment rep1 | GSE8712 | The effects of Yariv-reagent on barley aleurone GA signaling | |
| 4.5 | 96.7 | GSM261047 | after 3 days in mannitol medium rep3 | GSE10330 | Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis | |
| 4.1 | 96.2 | GSM238436 | Embryo 48 h; Seed germination; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 90.8 | 1617601_at | At3g51140 | similar to heat shock protein binding | - | 1e-12 | At3g51140 | - | O.I. | H.G. | S.X. | |
| 0.72 | 89.7 | 1614634_at | At3g51140 | hypothetical protein LOC100249595 | - | 1e-43 | At1g65260 | PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4) | O.I. | H.G. | S.X. | |
| 0.67 | 87.9 | 1616095_at | At3g51140 | hypothetical protein LOC100265683 | - | 1e-45 | At1g66670 | CLPP3 | O.I. | H.G. | S.X. | |
| 0.56 | 79.4 | 1609611_at | At3g51140 | hypothetical protein LOC100254000 | - | 9e-39 | At5g45390 | CLPP4 (CLP PROTEASE P4) | O.I. | H.G. | S.X. | |
| 0.56 | 79.4 | 1620027_at | At3g51140 | similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | - | 6e-25 | At1g62390 | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | O.I. | H.G. | S.X. | |
| 0.52 | 73.9 | 1613601_at | At3g51140 | starch synthase VI | - | 5e+0 | At5g42630 | ATS (ABERRANT TESTA SHAPE) | O.I. | H.G. | S.X. | |
| 0.48 | 68.8 | 1618651_at | At3g51140 | hypothetical protein LOC100241531 | - | 5e-13 | At5g52960 | unknown protein | O.I. | H.G. | S.X. | |
| 0.44 | 64.1 | 1611610_at | At3g51140 | hypothetical protein LOC100246037 | - | 8e-22 | At3g17240 | mtLPD2 (LIPOAMIDE DEHYDROGENASE 2) | O.I. | H.G. | S.X. | |
| 0.44 | 64.1 | 1613745_s_at | At3g51140 | hypothetical protein LOC100257396 /// hypothetical protein LOC100268135 | - | 4e-4 | At2g22360 | DNAJ heat shock family protein | O.I. | H.G. | S.X. | |
| 0.43 | 61.5 | 1608792_s_at | At3g51140 | hypothetical protein LOC100250896 | - | 2e-138 | At5g50920 | CLPC1 | O.I. | H.G. | S.X. | |
| 0.39 | 54.9 | 1619780_at | At3g51140 | hypothetical protein LOC100261596 | - | 8e-25 | At2g26930 | ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE) | O.I. | H.G. | S.X. | |
| 0.38 | 53.6 | 1606838_at | At3g51140 | hypothetical protein LOC100268132 | - | 3e-2 | At1g68280 | thioesterase-related | O.I. | H.G. | S.X. | |
| 0.37 | 51.7 | 1609394_at | At3g51140 | hypothetical protein LOC100257777 | - | 2e-39 | At4g36910 | LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) | O.I. | H.G. | S.X. | |
| 0.36 | 50.7 | 1617099_at | At3g51140 | hypothetical protein LOC100251893 | - | 1e+0 | At5g50335 | unknown protein | O.I. | H.G. | S.X. | |
| 0.35 | 48.5 | 1616440_at | At3g51140 | hypothetical protein LOC100240863 | - | 4e-3 | At5g03900 | - | O.I. | H.G. | S.X. | |
| 0.31 | 41.3 | 1621694_at | At3g51140 | hypothetical protein LOC100251009 | - | 7e-12 | At5g17560 | BolA-like family protein | O.I. | H.G. | S.X. | |
| 0.29 | 37.7 | 1606673_at | At3g51140 | hypothetical protein LOC100253524 | - | 1e-13 | At3g10620 | ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage