Co-expression analysis

Gene ID Contig9101_s_at
Gene name
Homology with ArabidopsisSimilar to At5g23930: mitochondrial transcription termination factor-related / mTERF-related (HF=7e+0)
Module size 8 genes
NF 0.63
%ile 85.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4661.00.89Contig9101_s_atContig9101--7e+0At5g23930mitochondrial transcription termination factor-related / mTERF-relatedO.I.H.G.S.X.
0.8092.50.89Contig8340_atContig8340--8e-3At2g41190amino acid transporter family proteinO.I.H.G.S.X.
0.7187.10.89Contig10972_atContig10972--1e-5At1g32500ATNAP6 (NON-INTRINSIC ABC PROTEIN 6)O.I.H.G.S.X.
0.6178.70.90Contig16253_atContig16253--7e+0At5g48515-O.I.H.G.S.X.
0.5774.90.90Contig11287_s_atContig11287--1e+0At5g15960KIN1O.I.H.G.S.X.
0.5674.30.89Contig9975_atContig9975--1e+0At1g27435unknown proteinO.I.H.G.S.X.
0.5066.90.90Contig8790_atContig8790--8e-17At5g02800protein kinase family proteinO.I.H.G.S.X.
0.5066.90.91Contig20219_atContig20219--1e-2At3g24770CLE41 (CLAVATA3/ESR-RELATED 41)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.898.6GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.897.0GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.897.0GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leavesLink to GEO
4.796.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.196.2GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.995.8GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.995.8GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.695.3GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.695.3GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.595.1GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage