Co-expression analysis

Gene ID Contig9099_at
Gene name
Homology with ArabidopsisSimilar to At4g26080: ABI1 (ABA INSENSITIVE 1) (HF=3e-3)
Module size 31 genes
NF 0.30
%ile 39.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8694.80.91Contig9099_atContig9099--3e-3At4g26080ABI1 (ABA INSENSITIVE 1)O.I.H.G.S.X.
0.6178.70.93HM04D16u_s_atHM04D16u--3e+0At5g10400histone H3O.I.H.G.S.X.
0.5975.80.93Contig5423_atContig5423--6e-1At1g09370enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.4863.20.95Contig6890_atContig6890--4e+0At5g34581hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4458.90.94Contig7217_x_atContig7217--4e-1Atcg01020-O.I.H.G.S.X.
0.3849.50.94Contig6964_s_atContig6964--9e-1At1g21890nodulin MtN21 family proteinO.I.H.G.S.X.
0.3849.50.95Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.3647.10.95Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.3647.10.94Contig23613_atContig23613--2e-12At3g54030protein kinase family proteinO.I.H.G.S.X.
0.3443.60.95Contig8310_atContig8310--2e-5At5g16510reversibly glycosylated polypeptide, putativeO.I.H.G.S.X.
0.3342.60.95Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeO.I.H.G.S.X.
0.3342.60.95Contig7333_atContig7333--6e-2At3g54360protein binding / zinc ion bindingO.I.H.G.S.X.
0.3342.60.95Contig12140_atContig12140--4e+0At5g54440unknown proteinO.I.H.G.S.X.
0.3240.30.96rbaak4i15_s_atrbaak4i15--2e-6At5g08680ATP synthase beta chain, mitochondrial, putativeO.I.H.G.S.X.
0.3138.60.95Contig20398_atContig20398--8e-3At2g42620MAX2 (MORE AXILLARY BRANCHES 2)O.I.H.G.S.X.
0.2935.50.95Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinO.I.H.G.S.X.
0.2935.50.95Contig8565_atContig8565--7e-10At3g13224RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2835.50.95Contig10647_atContig10647--2e-46At2g20930-O.I.H.G.S.X.
0.2835.50.95Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)O.I.H.G.S.X.
0.2630.40.95Contig8348_atContig8348--7e-28At4g35410clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.2528.90.94Contig20472_atContig20472--1e+0At2g35460harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.2122.60.96Contig8766_atContig8766--8e-7At4g12130aminomethyltransferaseO.I.H.G.S.X.
0.2122.60.95Contig11372_atContig11372--5e-7At3g27100-O.I.H.G.S.X.
0.2021.10.95Contig5874_s_atContig5874--1e+0At1g48610AT hook motif-containing proteinO.I.H.G.S.X.
0.2021.10.95Contig14802_atContig14802--1e-1At2g42070ATNUDX23 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23)O.I.H.G.S.X.
0.1716.90.95Contig5734_atContig5734--7e+0At4g37409unknown proteinO.I.H.G.S.X.
0.1615.30.94Contig11284_atContig11284--9e-6At2g22475GEM (GL2-EXPRESSION MODULATOR)O.I.H.G.S.X.
0.1615.30.94Contig10179_s_atContig10179--4e+0At5g41401unknown proteinO.I.H.G.S.X.
0.1615.30.95Contig4610_s_atContig4610--2e+0At5g01880zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1514.10.96Contig5257_atContig5257--1e+0At4g00200DNA bindingO.I.H.G.S.X.
0.108.40.95Contig5724_atContig5724--4e-12At1g06570PDS1 (PHYTOENE DESATURATION 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.695.3GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.792.7GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.692.3GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.591.9GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.491.4GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.390.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.390.9GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.390.9GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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