Co-expression analysis

Gene ID	Contig9053_at
Gene name
Homology with Arabidopsis	Similar to At4g36750: quinone reductase family protein (HF=5e-20)
Module size	7 genes
NF	0.04
%ile	5.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.87	Contig9053_at	Contig9053	-	-	5e-20	At4g36750	quinone reductase family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.89	rbah28p12_s_at	rbah28p12	-	-	1e-3	At4g31750	WIN2 (HOPW1-1-INTERACTING 2)	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.91	rbah28p12_at	rbah28p12	-	-	1e-3	At4g31750	WIN2 (HOPW1-1-INTERACTING 2)	O.I.	H.G.	S.X.	Please select
0.09	7.4	0.89	Contig16757_at	Contig16757	-	-	3e-2	At3g09570	-	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.89	Contig13678_at	Contig13678	-	-	9e-6	At3g26744	ICE1 (INDUCER OF CBF EXPRESSION 1)	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.91	Contig7425_at	Contig7425	-	-	2e-41	At1g62740	stress-inducible protein, putative	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.91	EBem10_SQ001_L08_at	EBem10_SQ001_L08	-	-	1e-1	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.7	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.5	97.6	GSM261075	Albina e-16 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.8	97.0	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.6	96.8	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.3	96.4	GSM261063	Xantha s-46 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.2	96.3	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.2	96.3	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
4.0	96.0	GSM261062	Xantha s-46 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.0	96.0	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.0	96.0	GSM238430	Embryo 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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