Co-expression analysis

Gene ID Contig9022_at
Gene name
Homology with ArabidopsisSimilar to At5g37680: ATARLA1A (ADP-ribosylation factor-like A1A) (HF=2e-55)
Module size 17 genes
NF 0.33
%ile 43.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8293.10.94Contig9022_atContig9022--2e-55At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)O.I.H.G.S.X.
0.4458.90.96Contig642_atContig642--4e-5At4g08930ATAPRL6 (APR-like 6)O.I.H.G.S.X.
0.4458.90.96Contig662_atContig662--1e-1At5g22240OFP10O.I.H.G.S.X.
0.4053.10.96Contig11475_atContig11475--1e-59At3g11540SPY (SPINDLY)O.I.H.G.S.X.
0.3950.50.95Contig8973_atContig8973--5e-10At3g47930ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)O.I.H.G.S.X.
0.3545.10.95Contig5361_atContig5361--3e+0At4g29103unknown proteinO.I.H.G.S.X.
0.3240.30.96Contig3421_atContig3421--7e-69At2g23080casein kinase II alpha chain, putativeO.I.H.G.S.X.
0.3138.60.95Contig10945_atContig10945--3e+0At5g24110WRKY30O.I.H.G.S.X.
0.3037.00.95Contig9780_atContig9780--8e-8At5g11040-O.I.H.G.S.X.
0.3037.00.95rbah36l17_s_atrbah36l17--7e-30At1g30580GTP bindingO.I.H.G.S.X.
0.2732.10.96Contig1660_atContig1660--6e-27At4g15415ATB' GAMMAO.I.H.G.S.X.
0.2732.10.97Contig6963_atContig6963--5e-11At5g02240binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.2528.90.95Contig10038_atContig10038--3e-15At1g68410protein phosphatase 2C-related / PP2C-relatedO.I.H.G.S.X.
0.2427.20.95Contig5347_atContig5347--1e-3At1g17770SUVH7 (SU(VAR)3-9 HOMOLOG 7)O.I.H.G.S.X.
0.2326.10.96Contig6527_atContig6527--8e-1At3g07350unknown proteinO.I.H.G.S.X.
0.1919.60.95Contig3741_s_atContig3741--1e-6At1g50200ALATS (ALANYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.1818.20.96HVSMEi0002I06r2_x_atHVSMEi0002I06r2--3e+0At3g02220unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.298.5GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.296.3GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.394.6GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.194.1GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.093.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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