Co-expression analysis

Gene ID	Contig8766_at
Gene name
Homology with Arabidopsis	Similar to At4g12130: aminomethyltransferase (HF=8e-7)
Module size	6 genes
NF	0.47
%ile	65.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.7	0.96	Contig8766_at	Contig8766	-	-	8e-7	At4g12130	aminomethyltransferase	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.97	Contig10647_at	Contig10647	-	-	2e-46	At2g20930	-	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.96	Contig9632_at	Contig9632	-	-	1e-1	At1g78370	ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.96	Contig11618_at	Contig11618	-	-	5e+0	At2g11890	adenylate cyclase	O.I.	H.G.	S.X.	Please select
0.42	55.2	0.96	Contig13332_at	Contig13332	-	-	2e+0	At1g68280	thioesterase-related	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.96	Contig24555_at	Contig24555	-	-	1e+0	At2g45070	SEC61 BETA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	95.5	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM261068	Albina f-17 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.3	94.6	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.9	93.4	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.9	93.4	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.9	93.4	GSM372983	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.8	93.1	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.7	92.7	GSM261054	Bonus Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.5	91.9	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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