Co-expression analysis

Gene ID Contig873_s_at
Gene name
Homology with ArabidopsisSimilar to At5g02500: HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) (HF=2e-121)
Module size 19 genes
NF 0.47
%ile 66.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7086.00.81Contig873_s_atContig873--2e-121At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.7891.20.86Contig24782_atContig24782--3e-11At3g19340-O.I.H.G.S.X.
0.7790.80.86Contig11315_atContig11315--1e-4At1g47970unknown proteinO.I.H.G.S.X.
0.6985.50.88Contig6155_atContig6155--7e-1At4g36540BEE2 (BR Enhanced Expression 2)O.I.H.G.S.X.
0.5874.90.89Contig9756_atContig9756--2e-47At3g62220serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.5470.30.87Contig21992_atContig21992--1e+0At3g56130biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.
0.5167.50.87Contig10438_atContig10438--2e-14At4g33260CDC20.2O.I.H.G.S.X.
0.5066.90.89Contig17827_atContig17827--2e+0At2g44110MLO15 (MILDEW RESISTANCE LOCUS O 15)O.I.H.G.S.X.
0.4963.70.86Contig16853_atContig16853--6e-4At2g02370-O.I.H.G.S.X.
0.4661.00.89Contig9470_atContig9470--6e+0At4g29980unknown proteinO.I.H.G.S.X.
0.4458.90.90Contig8625_atContig8625--2e-1At3g04880DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)O.I.H.G.S.X.
0.4053.10.89Contig2784_atContig2784--2e-13At5g19760dicarboxylate/tricarboxylate carrier (DTC)O.I.H.G.S.X.
0.3950.50.88Contig4775_atContig4775--2e-13At5g64200ATSC35O.I.H.G.S.X.
0.3950.50.90Contig9864_atContig9864--4e-8At1g32070ATNSI (NUCLEAR SHUTTLE INTERACTING)O.I.H.G.S.X.
0.3849.50.89Contig723_atContig723--8e-14At2g1975040S ribosomal protein S30 (RPS30A)O.I.H.G.S.X.
0.3443.60.89Contig7258_atContig7258--5e+0At5g46030unknown proteinO.I.H.G.S.X.
0.3240.30.89Contig14102_atContig14102--1e-1At2g32765SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5)O.I.H.G.S.X.
0.2528.90.91rbaal31m19_s_atrbaal31m19--2e+0At5g21110unknown proteinO.I.H.G.S.X.
0.2224.20.90Contig11298_atContig11298--1e-4At1g02880TPK1 (THIAMIN PYROPHOSPHOKINASE1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.298.0GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.497.5GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.696.8GSM160464drought control rep1GSE6990Barley drought stressLink to GEO
3.394.6GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
2.993.4GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.792.7GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.692.3GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.591.9GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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