Co-expression analysis

Gene ID Contig8520_at
Gene name
Homology with ArabidopsisSimilar to At1g22610: C2 domain-containing protein (HF=2e-5)
Module size 6 genes
NF 0.53
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.87Contig8520_atContig8520--2e-5At1g22610C2 domain-containing proteinO.I.H.G.S.X.
0.7388.70.91Contig8487_atContig8487--8e-6At1g28490SYP61 (SYNTAXIN OF PLANTS 61)O.I.H.G.S.X.
0.6784.70.91Contig11552_atContig11552--1e-13At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.H.G.S.X.
0.5572.00.91Contig9746_atContig9746--6e+0At4g24990ATGP4O.I.H.G.S.X.
0.3849.50.89Contig20641_atContig20641--9e-1At5g01380transcription factorO.I.H.G.S.X.
0.2224.20.91HV09F14u_atHV09F14u--3e-1At1g71440PFI (PFIFFERLING)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.498.5GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.796.9GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.595.1GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.494.8GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.294.3GSM146360Golden Promise Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.993.4GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.893.1GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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