Co-expression analysis

Gene ID Contig8499_at
Gene name
Homology with ArabidopsisSimilar to At1g03280: transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein (HF=3e-7)
Module size 6 genes
NF 0.24
%ile 30.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.70.94Contig8499_atContig8499--3e-7At1g03280transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family proteinO.I.H.G.S.X.
0.4661.00.95Contig6469_atContig6469--3e-37At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.3647.10.96Contig6757_atContig6757--3e-4At1g72550tRNA synthetase beta subunit family proteinO.I.H.G.S.X.
0.1615.30.96Contig8166_atContig8166--4e-11At5g49940NFU2 (NIFU-LIKE PROTEIN 2)O.I.H.G.S.X.
0.1412.90.95Contig18816_atContig18816--3e+0At1g711806-phosphogluconate dehydrogenase NAD-binding domain-containing proteinO.I.H.G.S.X.
0.1311.60.95Contig6267_atContig6267--2e-7At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
7.698.6GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
7.498.5GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.198.0GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.097.9GSM261037Dicktoo-subzero-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
5.597.6GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
5.097.2GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.595.1GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
3.494.8GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.494.8GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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