| Gene ID | Contig8230_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At4g04860: DER2.2 (DERLIN-2.2) (HF=3e-24) |
| Module size | 6 genes |
| NF | 0.30 |
| %ile | 39.7 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.56 | 74.3 | 0.95 | Contig8230_at | Contig8230 | - | - | 3e-24 | At4g04860 | DER2.2 (DERLIN-2.2) | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.96 | Contig15661_at | Contig15661 | - | - | 5e-17 | At4g17530 | ATRAB1C | O.I. | H.G. | S.X. | |
| 0.40 | 53.1 | 0.96 | Contig14241_at | Contig14241 | - | - | 2e+0 | At3g16250 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1) | O.I. | H.G. | S.X. | |
| 0.26 | 30.4 | 0.96 | Contig10115_at | Contig10115 | - | - | 7e-1 | At5g48220 | indole-3-glycerol phosphate synthase, putative | O.I. | H.G. | S.X. | |
| 0.20 | 21.1 | 0.95 | Contig25401_at | Contig25401 | - | - | 4e-3 | At1g78710 | unknown protein | O.I. | H.G. | S.X. | |
| 0.18 | 18.2 | 0.95 | Contig10800_at | Contig10800 | - | - | 2e-53 | At1g69960 | PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 6.0 | 97.9 | GSM238413 | Endosperm 4DAF; Seed development; Rep 2 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 5.7 | 97.7 | GSM238412 | Endosperm 4DAF; Seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 4.6 | 96.8 | GSM261038 | Dicktoo-subzero-rep3 | GSE10329 | Low temperature stress in cv. Dicktoo | |
| 4.3 | 96.4 | GSM261079 | Albina e-16 Hardened rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 4.3 | 96.4 | GSM261036 | Dicktoo-subzero-rep1 | GSE10329 | Low temperature stress in cv. Dicktoo | |
| 3.8 | 95.7 | GSM261070 | Albina f-17 Control rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 3.8 | 95.7 | GSM238410 | Pericarp 8DAF; seed development; Rep 1 | GSE9365 | Expression data from barley maturing and germinating grains | |
| 3.6 | 95.3 | GSM372956 | genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1 | GSE14930 | Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene | |
| 3.5 | 95.1 | GSM261073 | Albina f-17 Hardened rep3 | GSE10332 | Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1 | |
| 3.5 | 95.1 | GSM398250 | Martin_0d_rep2 | GSE15970 | Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 78.6 | PtpAffx.5545.1.S1_a_at | At4g04860 | hypothetical protein | - | 9e-77 | At4g04860 | DER2.2 (DERLIN-2.2) | O.I. | H.G. | S.X. | |
| 0.44 | 71.9 | Ptp.2197.1.A1_at | At4g04860 | hypothetical protein | - | 9e-21 | At5g18630 | lipase class 3 family protein | O.I. | H.G. | S.X. | |
| 0.40 | 67.0 | Ptp.7493.1.S1_s_at | At4g04860 | glutathione peroxidase | - | 2e-34 | At4g11600 | ATGPX6 (GLUTATHIONE PEROXIDASE 6) | O.I. | H.G. | S.X. | |
| 0.38 | 63.7 | PtpAffx.7528.1.S1_at | At4g04860 | hypothetical protein | - | 6e-10 | At4g35980 | unknown protein | O.I. | H.G. | S.X. | |
| 0.29 | 50.5 | PtpAffx.17912.1.A1_at | At4g04860 | hypothetical protein | - | 9e-59 | At1g72340 | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | O.I. | H.G. | S.X. | |
| 0.15 | 25.3 | PtpAffx.8850.1.A1_at | At4g04860 | hypothetical protein | - | 4e-16 | At1g13580 | LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage