Co-expression analysis

Gene ID Contig8141_at
Gene name
Homology with ArabidopsisSimilar to At5g07950: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.44
%ile 61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4053.10.96Contig8141_atContig8141--2e+0At5g07950unknown proteinO.I.H.G.S.X.
0.5066.90.97Contig9632_atContig9632--1e-1At1g78370ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)O.I.H.G.S.X.
0.5066.90.97Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinO.I.H.G.S.X.
0.4356.40.96Contig6890_atContig6890--4e+0At5g34581hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3647.10.97rbags1e22_s_atrbags1e22--3e-1At3g56360unknown proteinO.I.H.G.S.X.
0.3545.10.96Contig10647_atContig10647--2e-46At2g20930-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.0GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.196.2GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.595.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.993.4GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
2.591.9GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
2.290.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.290.3GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
2.290.3GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.189.7GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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