Co-expression analysis

Gene ID	Contig7987_at
Gene name
Homology with Arabidopsis	Similar to At1g67280: lactoylglutathione lyase, putative / glyoxalase I, putative (HF=3e-15)
Module size	8 genes
NF	0.60
%ile	82.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.70	86.0	0.95	Contig7987_at	Contig7987	-	-	3e-15	At1g67280	lactoylglutathione lyase, putative / glyoxalase I, putative	O.I.	H.G.	S.X.	Please select
0.71	87.1	0.96	Contig9559_at	Contig9559	-	-	2e-5	At3g13320	CAX2 (CATION EXCHANGER 2)	O.I.	H.G.	S.X.	Please select
0.63	80.3	0.95	Contig11680_at	Contig11680	-	-	2e-3	At1g74660	MIF1 (MINI ZINC FINGER 1)	O.I.	H.G.	S.X.	Please select
0.56	74.3	0.96	Contig10891_s_at	Contig10891	-	-	7e-1	At3g50695	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.95	Contig16415_at	Contig16415	-	-	4e-12	At1g08630	THA1 (Threonine Aldolase 1)	O.I.	H.G.	S.X.	Please select
0.52	68.3	0.95	Contig10690_at	Contig10690	-	-	2e-5	At2g35530	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig13528_at	Contig13528	-	-	9e-9	At1g29690	CAD1 (constitutively activated cell death 1)	O.I.	H.G.	S.X.	Please select
0.48	63.2	0.96	Contig10050_s_at	Contig10050	-	-	5e-2	At2g25052	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	95.7	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM238418	Endosperm 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM282034	Malting_steeped_Morex_rep1	GSE11200	Expression data from malting barley seeds
3.0	93.8	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
2.9	93.4	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
2.9	93.4	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.9	93.4	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
2.8	93.1	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.8	93.1	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
2.7	92.7	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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