Co-expression analysis

Gene ID	Contig7944_at
Gene name
Homology with Arabidopsis	Similar to At5g43370: APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) (HF=1e-1)
Module size	6 genes
NF	0.34
%ile	46.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.80	Contig7944_at	Contig7944	-	-	1e-1	At5g43370	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Franka_b_3pri7_s_at	Franka_b_3pri7	Mla7 protein	-	2e+0	At4g08460	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Franka_3pri12_s_at	Franka_3pri12	-	-	2e+0	At4g25700	BETA-OHASE 1 (BETA-HYDROXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.96	Contig7226_at	Contig7226	-	-	2e-21	At3g54540	ATGCN4	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.81	HV14J05u_x_at	HV14J05u	-	-	6e+0	At2g41430	ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15)	O.I.	H.G.	S.X.	Please select
0.13	11.6	0.87	HVSMEn0025G16r2_at	HVSMEn0025G16r2	-	-	3e-7	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.3	99.1	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.8	98.9	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.3	98.8	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.0	98.4	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.4	98.1	GSM261038	Dicktoo-subzero-rep3	GSE10329	Low temperature stress in cv. Dicktoo
6.4	98.1	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.6	97.7	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.6	97.7	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2	97.4	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.2	97.4	GSM372949	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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