Co-expression analysis

Gene ID Contig7736_at
Gene name
Homology with ArabidopsisSimilar to At1g80160: lactoylglutathione lyase family protein / glyoxalase I family protein (HF=2e-12)
Module size 19 genes
NF 0.35
%ile 47.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8694.80.93Contig7736_atContig7736--2e-12At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.5066.90.94Contig8872_atContig8872--1e-5At5g57660zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.5066.90.97Contig8241_atContig8241--1e+0At4g19390-O.I.H.G.S.X.
0.4458.90.95HS07P13u_s_atHS07P13u--5e-5At3g1678060S ribosomal protein L19 (RPL19B)O.I.H.G.S.X.
0.4458.90.96Contig10700_atContig10700--2e+0At4g15990unknown proteinO.I.H.G.S.X.
0.4356.40.97Contig3541_s_atContig3541--2e-5At2g36390SBE2.1 (starch branching enzyme 2.1)O.I.H.G.S.X.
0.4255.20.96EBed02_SQ003_C14_s_atEBed02_SQ003_C14--3e+0At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4255.20.95HVSMEb0010L13r2_atHVSMEb0010L13r2--1e+0At5g19970unknown proteinO.I.H.G.S.X.
0.3647.10.96Contig18852_atContig18852--1e+0At1g31630AGL86 (AGAMOUS-LIKE 86)O.I.H.G.S.X.
0.3647.10.97Contig15613_atContig15613--7e-16At3g48860unknown proteinO.I.H.G.S.X.
0.3342.60.96HT06A08u_s_atHT06A08u--8e-4At1g2691060S ribosomal protein L10 (RPL10B)O.I.H.G.S.X.
0.3138.60.97HU14M19u_s_atHU14M19u--3e+0At1g7406060S ribosomal protein L6 (RPL6B)O.I.H.G.S.X.
0.3138.60.95Contig6767_s_atContig6767--2e-11At1g13640phosphatidylinositol 3- and 4-kinase family proteinO.I.H.G.S.X.
0.2835.50.96Contig8333_atContig8333--4e-2At3g56510TBP-binding protein, putativeO.I.H.G.S.X.
0.2528.90.97Contig19387_atContig19387--2e-1At3g30580unknown proteinO.I.H.G.S.X.
0.2427.20.95HS17I13u_s_atHS17I13u--7e-1At1g42480unknown proteinO.I.H.G.S.X.
0.2326.10.96EBpi03_SQ003_A03_s_atEBpi03_SQ003_A03--6e-4At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.2122.60.97Contig8051_atContig8051--1e-21At1g70980SYNC3O.I.H.G.S.X.
0.1210.40.95Contig940_s_atContig940--3e-14At3g52930fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.494.8GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.093.8GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
2.893.1GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
2.792.7GSM161220cold treatment rep2GSE6993Barley low temperature stressLink to GEO
2.792.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
2.692.3GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.692.3GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
2.591.9GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
2.591.9GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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