Co-expression analysis

Gene ID	Contig7723_at
Gene name
Homology with Arabidopsis	Similar to At5g55280: FTSZ1-1 (HF=2e+0)
Module size	6 genes
NF	0.76
%ile	94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.87	Contig7723_at	Contig7723	-	-	2e+0	At5g55280	FTSZ1-1	O.I.	H.G.	S.X.	Please select
0.80	92.5	0.90	Contig20289_at	Contig20289	-	-	9e-1	At1g77746	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.88	Contig4900_at	Contig4900	-	-	3e-12	At1g04760	ATVAMP726	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig6637_s_at	Contig6637	-	-	1e-34	At5g47820	FRA1 (FRAGILE FIBER 1)	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.90	Contig16089_at	Contig16089	-	-	9e-15	At4g33380	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	75.8	0.88	Contig14088_x_at	Contig14088	-	-	3e-2	At1g76050	pseudouridine synthase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.5	99.8	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
23.7	99.8	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
20.6	99.7	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.3	98.5	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
7.0	98.4	GSM282028	Malting_day1_Merit_rep1	GSE11200	Expression data from malting barley seeds
6.8	98.3	GSM282024	Malting_day4_Merit_rep2	GSE11200	Expression data from malting barley seeds
6.2	98.0	GSM282039	Malting_day4_Morex_rep2	GSE11200	Expression data from malting barley seeds
5.7	97.7	GSM282029	Malting_day1_Merit_rep3	GSE11200	Expression data from malting barley seeds
5.5	97.6	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.6	96.8	GSM282022	Malting_day4_Merit_rep4	GSE11200	Expression data from malting barley seeds

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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