Co-expression analysis

Gene ID	Contig7600_at
Gene name
Homology with Arabidopsis	Similar to At5g41570: WRKY24 (HF=2e-1)
Module size	6 genes
NF	0.55
%ile	76.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.97	Contig7600_at	Contig7600	-	-	2e-1	At5g41570	WRKY24	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.96	Contig2867_at	Contig2867	-	-	8e-14	At5g01320	pyruvate decarboxylase, putative	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.96	Contig17502_at	Contig17502	-	-	2e+0	At4g03965	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.97	Contig6716_at	Contig6716	-	-	2e-25	At4g31780	MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.98	Contig11272_at	Contig11272	-	-	8e-2	At5g40080	60S ribosomal protein-related	O.I.	H.G.	S.X.	Please select
0.28	35.5	0.97	Contig9716_at	Contig9716	-	-	3e-6	At5g46800	BOU (A BOUT DE SOUFFLE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.1	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.4	94.8	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
3.2	94.3	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.2	94.3	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
3.0	93.8	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
2.7	92.7	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.7	92.7	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
2.7	92.7	GSM68890	3 h control replicate 2	GSE3097	Barley1 salinity stress study
2.5	91.9	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
2.5	91.9	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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