Co-expression analysis

Gene ID	Contig7564_at
Gene name
Homology with Arabidopsis	Similar to At2g32080: PUR ALPHA-1 (HF=4e-5)
Module size	6 genes
NF	0.10
%ile	12.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.92	Contig7564_at	Contig7564	-	-	4e-5	At2g32080	PUR ALPHA-1	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.90	Contig15957_at	Contig15957	-	-	3e+0	At5g07100	WRKY26	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.92	HVSMEm0007D17r2_at	HVSMEm0007D17r2	-	-	5e+0	At5g59050	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	15.3	0.93	AF016328_at	AF016328	-	-	7e-2	At1g75050	-	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.93	HT11O19u_at	HT11O19u	-	-	4e-5	At4g33080	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.92	HVSMEb0009N20r2_at	HVSMEb0009N20r2	-	-	6e+0	At3g50960	PLP3a (Phosducin-like protein 3 homolog)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.5	99.7	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
16.2	99.6	GSM146364	Maythorpe Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.6	99.0	GSM146361	Golden Promise Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.2	98.5	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.5	98.2	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.0	97.9	GSM146367	Maythorpe Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.4	96.6	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.1	96.2	GSM146366	Maythorpe Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.9	95.8	GSM146363	Maythorpe Root Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.7	95.5	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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