Co-expression analysis

Gene ID Contig7518_at
Gene name
Homology with ArabidopsisSimilar to At1g64107: - (HF=2e+0)
Module size 7 genes
NF 0.25
%ile 31.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4356.40.86Contig7518_atContig7518--2e+0At1g64107-O.I.H.G.S.X.
0.4661.00.92Contig23702_atContig23702--9e+0At5g62330-O.I.H.G.S.X.
0.2732.10.92Contig10995_atContig10995--3e+0At5g10890myosin heavy chain-relatedO.I.H.G.S.X.
0.1919.60.90EBpi01_SQ002_N15_atEBpi01_SQ002_N15--4e+0At5g15210ATHB30 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 30)O.I.H.G.S.X.
0.1818.20.89Contig8329_atContig8329--2e+0At3g51100unknown proteinO.I.H.G.S.X.
0.1716.90.92Contig16208_atContig16208--5e+0At5g01650macrophage migration inhibitory factor family protein / MIF family proteinO.I.H.G.S.X.
0.1514.10.90Contig2407_s_atContig2407--2e+0At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.496.6GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.795.5GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.194.1GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.993.4GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM372988genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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