Co-expression analysis

Gene ID Contig7486_at
Gene name
Homology with ArabidopsisSimilar to At4g26220: caffeoyl-CoA 3-O-methyltransferase, putative (HF=2e+0)
Module size 8 genes
NF 0.60
%ile 82.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.92Contig7486_atContig7486--2e+0At4g26220caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.7187.10.92Contig4454_atContig4454--2e-26At3g18190chaperonin, putativeO.I.H.G.S.X.
0.7086.00.93Contig10368_atContig10368--4e-1At1g36940unknown proteinO.I.H.G.S.X.
0.6380.30.96Contig4453_atContig4453--3e-3At1g14700PAP3 (PURPLE ACID PHOSPHATASE 3)O.I.H.G.S.X.
0.5975.80.94Contig7585_atContig7585--2e+0At3g54490RPB5E (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, E)O.I.H.G.S.X.
0.4356.40.96Contig3480_atContig3480--4e-1At5g16660unknown proteinO.I.H.G.S.X.
0.4255.20.93Contig12024_atContig12024--3e-32At5g20930TSL (TOUSLED)O.I.H.G.S.X.
0.3647.10.97Contig4455_atContig4455--5e-1At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
7.098.4GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.998.3GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.898.3GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.398.1GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.097.9GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.797.7GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.897.0GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.795.5GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.595.1GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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