Co-expression analysis

Gene ID	Contig7448_at
Gene name
Homology with Arabidopsis	Similar to At1g78340: ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22) (HF=1e-1)
Module size	6 genes
NF	0.73
%ile	93.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.92	Contig7448_at	Contig7448	-	-	1e-1	At1g78340	ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.91	Contig7755_s_at	Contig7755	-	-	2e-1	At5g17165	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	HT12P23u_at	HT12P23u	-	-	3e-1	At2g34520	RPS14 (mitochondrial ribosomal protein S14)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.91	Contig2360_at	Contig2360	-	-	2e-27	At1g31800	CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.91	Contig7596_at	Contig7596	-	-	6e-8	At1g64790	binding	O.I.	H.G.	S.X.	Please select
0.47	62.2	0.91	Contig5943_s_at	Contig5943	-	-	3e-1	At2g20725	CAAX amino terminal protease family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.0	99.7	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
14.1	99.5	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
13.2	99.4	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
12.4	99.4	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
9.3	99.0	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
8.5	98.8	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
8.2	98.7	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
7.4	98.5	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
6.9	98.3	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.2	97.4	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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