Co-expression analysis

Gene ID Contig7437_at
Gene name
Homology with ArabidopsisSimilar to At1g07040: unknown protein (HF=3e-6)
Module size 12 genes
NF 0.26
%ile 33.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.94Contig7437_atContig7437--3e-6At1g07040unknown proteinO.I.H.G.S.X.
0.4863.20.95Contig8902_s_atContig8902--2e+0At5g06750protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.3545.10.96rbags12j06_s_atrbags12j06--4e+0At3g48880F-box family proteinO.I.H.G.S.X.
0.3342.60.95Contig10570_atContig10570--6e-8At4g38250amino acid transporter family proteinO.I.H.G.S.X.
0.2935.50.96HS07L08u_s_atHS07L08u--1e+0At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.2835.50.95Contig4927_s_atContig4927--4e-1At1g16880uridylyltransferase-relatedO.I.H.G.S.X.
0.2427.20.96Contig4106_atContig4106--4e+0At2g42760unknown proteinO.I.H.G.S.X.
0.2427.20.95Contig17899_atContig17899--2e+0At4g20690unknown proteinO.I.H.G.S.X.
0.2021.10.95Contig4647_atContig4647--3e-3At2g37990ribosome biogenesis regulatory protein (RRS1) family proteinO.I.H.G.S.X.
0.1919.60.95Contig9283_atContig9283--1e-11At5g16940carbon-sulfur lyaseO.I.H.G.S.X.
0.1412.90.95Contig2820_atContig2820--2e-7At1g79920ATP bindingO.I.H.G.S.X.
0.1412.90.95Contig2343_s_atContig2343--1e+0At5g26010catalytic/ protein serine/threonine phosphataseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.1GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.893.1GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.792.7GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.792.7GSM372999genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
2.591.9GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.591.9GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.491.4GSM3634635 mM B(OH)3 treatment (5B) - rep1GSE14521Late response to boron toxicity in barley leavesLink to GEO
2.491.4GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.390.9GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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