Co-expression analysis

Gene ID Contig7360_at
Gene name
Homology with ArabidopsisSimilar to At4g19620: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.53
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.97Contig7360_atContig7360--3e+0At4g19620unknown proteinO.I.H.G.S.X.
0.7187.10.97Contig2343_s_atContig2343--1e+0At5g26010catalytic/ protein serine/threonine phosphataseO.I.H.G.S.X.
0.6077.30.97Contig11477_atContig11477--8e-5At1g79040PSBR (photosystem II subunit R)O.I.H.G.S.X.
0.5066.90.96Contig10661_atContig10661--2e+0At3g15680zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.5066.90.96Contig10945_atContig10945--3e+0At5g24110WRKY30O.I.H.G.S.X.
0.3138.60.96Contig1512_atContig1512--0At5g12250TUB6 (BETA-6 TUBULIN)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.499.2GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.299.0GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.398.1GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.497.5GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM440973Stressed awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.396.4GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.895.7GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.15291.1.S1_at, orthologous to the query gene, Contig7360_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4658.4Zm.15291.1.S1_atAt4g19620CONSTANS-like protein CO6-1e-1At4g15490UGT84A3O.I.H.G.S.X.
0.6785.8ZmAffx.216.1.A1_atAt4g19620--1e+1At5g44970-O.I.H.G.S.X.
0.6179.5Zm.15546.1.A1_atAt4g19620hypothetical protein LOC100276392-1e+0At5g01734unknown proteinO.I.H.G.S.X.
0.6179.5Zm.19.1.S1_atAt4g19620phospholipid transfer protein homolog1-5e+0At4g32105galactosyltransferaseO.I.H.G.S.X.
0.5369.1ZmAffx.207.1.S1_atAt4g19620--5e-2At1g01390UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.
0.4658.4Zm.3153.3.S1_a_atAt4g19620B12D protein-1e-3At1g20440COR47 (COLD-REGULATED 47)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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