Co-expression analysis

Gene ID	Contig7315_at
Gene name
Homology with Arabidopsis	Similar to At1g54060: ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1) (HF=1e+0)
Module size	6 genes
NF	0.34
%ile	45.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.82	Contig7315_at	Contig7315	-	-	1e+0	At1g54060	ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.84	Contig19839_at	Contig19839	-	-	7e+0	At5g17180	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.88	Contig3187_s_at	Contig3187	-	-	1e+0	At1g31410	putrescine-binding periplasmic protein-related	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.82	Contig4121_at	Contig4121	-	-	2e-45	At4g24830	arginosuccinate synthase family	O.I.	H.G.	S.X.	Please select
0.19	19.6	0.83	Contig22871_at	Contig22871	-	-	4e-16	At2g04410	-	O.I.	H.G.	S.X.	Please select
0.16	15.3	0.88	Contig18743_at	Contig18743	-	-	1e+0	At4g12350	MYB42 (myb domain protein 42)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.9	99.7	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
7.9	98.7	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
5.9	97.9	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.1	97.3	GSM146372	Golden Promise shoot Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.3	96.4	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
4.2	96.3	GSM440973	Stressed awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
4.0	96.0	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.9	95.8	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
3.9	95.8	GSM71148	OWB-R unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
3.7	95.5	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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