Co-expression analysis

Gene ID Contig7283_at
Gene name
Homology with ArabidopsisSimilar to At2g26760: CYCB1 (HF=5e-8)
Module size 6 genes
NF 0.85
%ile 98.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.92Contig7283_atContig7283--5e-8At2g26760CYCB1O.I.H.G.S.X.
0.8394.00.91Contig13153_atContig13153--4e+0At1g63460glutathione peroxidase, putativeO.I.H.G.S.X.
0.8394.00.91L32165_s_atL32165--0At5g42020BIP2O.I.H.G.S.X.
0.7790.80.92Contig13099_atContig13099--1e+0At5g52130unknown proteinO.I.H.G.S.X.
0.7388.70.93Contig16153_atContig16153--1e+0At1g27760interferon-related developmental regulator family protein / IFRD protein familyO.I.H.G.S.X.
0.6784.70.92Contig50_x_atContig50--3e+0At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.496.6GSM311259kara_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
4.296.3GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.093.8GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.993.4GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM311253hsp5_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
2.792.7GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.692.3GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seedsLink to GEO
2.692.3GSM372989genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.14556.1.S1_x_at, orthologous to the query gene, Contig7283_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7188.0Ta.14556.1.S1_x_atAt2g26760--4e+0At3g11520CYCB1O.I.H.G.S.X.
0.8694.1Ta.14556.2.A1_atAt2g26760--6e+0At5g06150CYC1BATO.I.H.G.S.X.
0.7790.8Ta.3357.1.A1_atAt2g26760--2e+0At4g33130-O.I.H.G.S.X.
0.7790.8Ta.14556.2.A1_x_atAt2g26760--6e+0At5g06150CYC1BATO.I.H.G.S.X.
0.7188.0TaAffx.91612.1.A1_atAt2g26760--4e+0At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.6786.3Ta.2157.1.A1_s_atAt2g26760--1e-1At4g27180ATK2 (ARABIDOPSIS THALIANA KINESIN 2)O.I.H.G.S.X.
0.6383.1Ta.2157.2.A1_a_atAt2g26760--3e-1At4g05190ATK5 (ARABIDOPSIS THALIANA KINESIN 5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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