Co-expression analysis

Gene ID Contig7205_at
Gene name
Homology with ArabidopsisSimilar to At2g32550: rcd1-like cell differentiation family protein (HF=2e-2)
Module size 6 genes
NF 0.52
%ile 72.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.94Contig7205_atContig7205--2e-2At2g32550rcd1-like cell differentiation family proteinO.I.H.G.S.X.
0.7388.70.95Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.7388.70.96Contig3334_atContig3334--2e-53At3g53610ATRAB8O.I.H.G.S.X.
0.7187.10.96Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.6784.70.98Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeO.I.H.G.S.X.
0.2224.20.95HA06i14r_s_atHA06i14r--8e-4At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.498.5GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.497.5GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.196.2GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.096.0GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.096.0GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.995.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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