Co-expression analysis

Gene ID	Contig7195_at
Gene name
Homology with Arabidopsis	Similar to At5g41210: ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) (HF=5e-1)
Module size	7 genes
NF	0.15
%ile	18.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	98.4	0.85	Contig7195_at	Contig7195	-	-	5e-1	At5g41210	ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.84	EBem09_SQ007_G10_at	EBem09_SQ007_G10	-	-	6e+0	At2g27310	F-box family protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.86	Contig3346_at	Contig3346	-	-	6e-2	At2g29850	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.84	Contig9570_s_at	Contig9570	-	-	1e+0	At5g57080	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	10.4	0.84	Contig2165_at	Contig2165	-	-	9e-35	At4g13930	SHM4 (serine hydroxymethyltransferase 4)	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.85	HA18O08r_s_at	HA18O08r	-	-	4e-6	At4g26530	fructose-bisphosphate aldolase, putative	O.I.	H.G.	S.X.	Please select
0.04	3.4	0.85	Contig6493_at	Contig6493	-	-	6e-2	At4g31080	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	98.6	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
6.1	98.0	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
6.0	97.9	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.0	97.9	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.8	97.8	GSM431572	pathogen isolates: Polymyxa betae - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.5	97.6	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
5.4	97.5	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.4	97.5	GSM431569	pathogen isolates: Mock inoculated control - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.1	97.3	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
5.1	97.3	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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