Co-expression analysis

Gene ID	Contig7157_at
Gene name
Homology with Arabidopsis	Similar to At2g24500: FZF (HF=2e-11)
Module size	6 genes
NF	0.58
%ile	80.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.90	Contig7157_at	Contig7157	-	-	2e-11	At2g24500	FZF	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.90	Contig16344_at	Contig16344	-	-	2e+0	At3g15410	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.90	Contig20244_at	Contig20244	-	-	2e-4	At4g37200	HCF164	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.90	Contig15381_at	Contig15381	-	-	5e-14	At5g14040	mitochondrial phosphate transporter	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.90	Contig18188_at	Contig18188	-	-	2e+0	At1g26820	RNS3 (RIBONUCLEASE 3)	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.90	Contig13773_at	Contig13773	-	-	5e+0	At5g24352	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.9	99.8	GSM281748	Genotype: Morex - rep1	GSE11182	Steptoe x Morex seedling leaf comparison
23.8	99.8	GSM281749	Genotype: Morex - rep2	GSE11182	Steptoe x Morex seedling leaf comparison
12.3	99.4	GSM281750	Genotype: Morex - rep3	GSE11182	Steptoe x Morex seedling leaf comparison
6.9	98.3	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
6.9	98.3	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
5.5	97.6	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.4	97.5	GSM398275	Moroc9-75_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.6	96.8	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.1	96.2	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.0	96.0	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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