Co-expression analysis

Gene ID	Contig7155_at
Gene name
Homology with Arabidopsis	Similar to At1g65520: ECI1 (DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1) (HF=3e-1)
Module size	7 genes
NF	0.44
%ile	61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	72.0	0.96	Contig7155_at	Contig7155	-	-	3e-1	At1g65520	ECI1 (DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1)	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.96	Contig1206_s_at	Contig1206	-	-	0	At5g56000	heat shock protein 81-4 (HSP81-4)	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.96	Contig12262_at	Contig12262	-	-	2e-1	At5g23405	high mobility group (HMG1/2) family protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.96	Contig10745_at	Contig10745	-	-	5e-1	At5g43380	TOPP6	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig5409_at	Contig5409	-	-	3e-18	At3g02580	STE1 (STEROL 1)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.97	Contig2046_at	Contig2046	-	-	5e+0	At1g60815	RALFL7 (RALF-LIKE 7)	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.96	Contig23171_at	Contig23171	-	-	2e+0	At1g11570	nuclear transport factor 2 (NTF2), putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.8	99.8	GSM238409	Pericarp 4DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
23.3	99.8	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
21.1	99.7	GSM146364	Maythorpe Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
20.1	99.7	GSM238408	Pericarp 4DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
12.4	99.4	GSM146367	Maythorpe Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.7	98.9	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.3	98.8	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.1	98.7	GSM146361	Golden Promise Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.6	98.2	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.5	97.6	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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